Software

Open-source tools, pipelines and resources developed by the lab.

RiboNet

An end-to-end package for preprocessing, modeling, and interpreting ribosome profiling data.

Pythonribosome profilingdeep learning

SLAC

A module for identifying crosstalks between tRNA modifications and charging.

PythontRNA sequencing

CUSTOM

A gene design tool for generating sequences with tisue-specific codon usage.

Pythoncodon usage

More on GitHub @compreggen.